FieldTrip

Note that this reference documentation is identical to the help that is displayed in Matlab when you type “help ft_plot_ortho”.

  FT_PLOT_ORTHO plots a 3 orthographic cuts through a 3-D volume
 
  Use as
    ft_plot_ortho(dat, ...)
  or
    ft_plot_ortho(dat, mask, ...)
  
  Additional options should be specified in key-value pairs and can be
    'style'        = string, 'subplot' or 'intersect' (default = 'subplot')
    'parents'      = (optional) 3-element vector containing the handles of
                       the axes for the subplots (when style = 'subplot')
    'surfhandle'   = (optional) 3-element vector containing the handles of 
                       the surfaces for each of the sublots (when style =
                       'subplot'). Parents and surfhandle are mutually
                       exclusive
    'transform'    = 4x4 homogeneous transformation matrix specifying the mapping from
                     voxel space to the coordinate system in which the data are plotted.
    'location'     = 1x3 vector specifying a point on the plane which will be plotted
                     the coordinates are expressed in the coordinate system in which the
                     data will be plotted. location defines the origin of the plane
    'orientation'  = 3x3 matrix specifying the directions orthogonal through the planes
                     which will be plotted.
    'datmask'      = 3D-matrix with the same size as the matrix dat, serving as opacitymap
                       if the second input argument to the function
                       contains a matrix, this will be used as the mask
    'interpmethod' = string specifying the method for the interpolation,
                       see INTERPN (default = 'nearest')
    'colormap'     = string, see COLORMAP
    'interplim'
 
  See also FT_PLOT_SLICE, FT_SOURCEPLOT