Note that this reference documentation is identical to the help that is displayed in Matlab when you type “help ft_checkcoordsys”.
FT_CHECKCOORDSYS plots a geometrical object, allowing you to perform a visual check on the coordinatesystem, the units and on the anatomical labels for the coordinate system axes. Use as [dataout] = ft_checkcoordsys(cfg, datain) where the input data structure can be - an anatomical MRI, which can be segmented - an electrode or gradiometer definition - a volume conduction model or most other FieldTrip structures that represent geometrical information. The configuration options are cfg.interactive = string, 'yes' or 'no' (default = 'yes') This function wil pop up a figure that allows you to check whether the aligntment of the object relative to the coordinate system axes is correct and what the anatomical labels of the coordinate system axes are. You should switch on the 3D rotation option in the figure panel to rotate and see the figure from all angles. To change the anatomical labels of the coordinate system, you should press the corresponding keyboard button. See also FT_VOLUMEREALIGN, FT_VOLUMERESLICE
Share this page: