2013-05-23 14:12 jorhor
* [r8145] private/warning_once.m: automatically synchronized identical files to revision
8144
2013-05-08 13:29 eelspa
* [r8115] private/undobalancing.m: automatically synchronized identical files to revision
8114
2013-04-18 15:17 roboos
* [r8053] ft_prepare_vol_sens.m: once more, trying to resolve svn rebase conflict
2013-04-18 15:15 roboos
* [r8023] ft_prepare_vol_sens.m: enhancement - pulled the branch oostenveld/bug1114,
improvements for dependency checks, removed some dependencies, see
http://bugzilla.fcdonders.nl/show_bug.cgi?id=1114
2013-04-10 19:04 roboos
* [r7775] private/mesh2edge.m: bugfix - copied mesh2edge function to forward/private to
resolve regression errror. It was related to the electrode to skin projection for simbio.
See bug1820.
2013-04-06 15:13 roboos
* [r7770] ft_prepare_vol_sens.m, private/project_elec.m: enhancement - ensure that
electrodes are explicitly projected onto the closest surface vertex of the SIMBIO mesh,
this assumes scalp electrodes. See http://bugzilla.fcdonders.nl/show_bug.cgi?id=1967
2013-04-02 19:23 roboos
* [r7745] ft_compute_leadfield.m: enhancement - do not deal with backward compatible grad in
ft_compute_leadfield, leave this to ft_prepare_vol_sens. Updated test script for #2085.
2013-03-31 12:13 roboos
* [r7733] ft_senstype.m: enhancement - use a consistent way of dealing with fieldtrip input
data structures
2013-03-31 12:13 roboos
* [r7732] ft_senslabel.m: enhancement - changed the persistent variable handling in
ft_senslabel, this should be much faster. Added it to the test script. See bug 2085
2013-03-16 14:55 roboos
* [r7676] ft_prepare_vol_sens.m: enhancement - pulled the branch oostenveld/bug1114,
improvements for dependency checks, removed some dependencies, see
http://bugzilla.fcdonders.nl/show_bug.cgi?id=1114
2013-03-16 09:45 roboos
* [r7675] private/ft_hastoolbox.m: automatically synchronized identical files to revision
7674
2013-03-13 16:29 roboos
* [r7660] private/getsubfield.m: automatically synchronized identical files to revision 7659
2013-03-04 15:29 roboos
* [r7569] private/ft_datatype_headmodel.m: automatically synchronized identical files to
revision 7568
2013-02-25 19:44 jansch
* [r7550] private/lmoutrn.m: documentation - updated
2013-02-25 19:31 jansch
* [r7549] private/lmoutrn.m: enhancement - replaced the call to pinv by pinvNx2
2013-02-25 19:09 jansch
* [r7548] private/pinvNx2.m: bugfix - added missing function for vectorized lmoutrn
2013-02-25 17:39 roboos
* [r7547] private/lmoutrn.m: bugfix - removed call to unknown pinvNx2 function by call to
pinv, this resolves ~5 test scripts that crash due to this.
2013-02-25 10:18 jansch
* [r7543] private/lmoutrn.m, private/plinprojn.m, private/project_elec.m,
private/ptriprojn.m: enhancement - implemented vectorized version of ptriproj, lmoutr and
plinproj to be used in project_elec. major speedum
2013-02-22 19:34 jansch
* [r7534] ft_prepare_vol_sens.m: enhancement - only compute forwpar if not yet existing,
replaced variable 'numel' by 'numelec', fixed typo in documentation
2013-02-19 09:41 roboos
* [r7500] private/ft_datatype_sens.m: automatically synchronized identical files to revision
7499
2013-02-19 09:38 roboos
* [r7498] private/ft_datatype_sens.m: automatically synchronized identical files to revision
7497
2013-02-19 09:25 roboos
* [r7495] ft_apply_montage.m, ft_senstype.m, private/undobalancing.m: enhancement - use
private/undobalancing as a better mechanism for converting comp data top the original
senstor type (e.g. ctf275). Don't give a warning about limited rank when just converting
for the senstype or positions. See bugzilla 1959.
2013-02-18 12:32 dieloz
* [r7488] ft_senstype.m: enhancement - bug1959/1990 Asking for grad.balance structure before
using it
2013-02-17 12:21 roboos
* [r7486] private/ft_hastoolbox.m: automatically synchronized identical files to revision
7485
2013-02-17 11:35 vlalit
* [r7484] ft_senslabel.m: automatically synchronized identical files to revision 7483
2013-02-15 16:05 dieloz
* [r7480] ft_senstype.m: enhancement - bug1959 using grad.balance structure to detect
sens.type in comp data type
2013-02-08 15:27 roboos
* [r7456] ft_compute_leadfield.m, ft_convert_units.m: enhancement - implemented a function
for converting the (neuromag) gradiometer definition from T into T/m (and other units).
Renamed unit into units for ft_compute_leadfield for consistency with cfg.units here and
there. Added feedback option to ft_convert_units, default=false. Made test script for
neuromag units. See bugzilla #953 and #963.
2013-02-04 12:53 roboos
* [r7436] private/channelposition.m: automatically synchronized identical files to revision
7435
2013-01-23 16:23 roevdmei
* [r7401] ft_voltype.m: bugfix, see bug 1940. There is now an explicit check on whether the
input is a grad or elec, skipping the first vol-type check. Also see bug 1948, when it's
fixed, the above changed should be reverted and a more robust check of voluminity should
be performed by ft_datatype.
2013-01-23 14:33 jorhor
* [r7394] ft_apply_montage.m: automatically synchronized identical files to revision 7393
2013-01-16 15:51 johzum
* [r7336] ft_convert_units.m: bugfix 1933: subfunction idrange did not handle input
including some NaNs, now it does.
2013-01-16 11:37 johzum
* [r7332] ft_fetch_headshape.m: restructuring - delete this function, since recent update to
ft_prepare_headmodel no longer requires it, and no other functions use it either.
2013-01-15 13:21 johzum
* [r7316] ft_headmodel_localspheres.m: restructuring - Changed ft_prepare_headmodel so the
input geometry is treated specific to each cfg.method option. Also changed corresponding
test functions that call ft_prepare_headmodel.
2013-01-14 15:44 roboos
* [r7310] ft_headmodel_bemcp.m, ft_headmodel_dipoli.m, ft_headmodel_openmeeg.m,
private/surface_nesting.m: enhancement - made the labels for the ordering consistent with
inside/outside, there should not be a functional change for the end users. See
http://bugzilla.fcdonders.nl/show_bug.cgi?id=1925
2013-01-14 12:41 johzum
* [r7304] ft_headmodel_openmeeg.m: bugfix1745 and enhancement: improved dealing with default
conductivity and order of boundaries.
2013-01-14 12:15 johzum
* [r7303] ft_headmodel_dipoli.m: enhancement: and related to bug1745. improved default
conductivity handling regarding order of boundaries.
2012-12-31 10:04 roboos
* [r7272] private/scalingfactor.m: automatically synchronized identical files to revision
7271
2012-12-27 10:53 roboos
* [r7263] ft_headmodel_concentricspheres.m, ft_headmodel_localspheres.m,
ft_headmodel_singlesphere.m, ft_voltype.m: bugfix - resolved regression issue in
test_bug1042 due to N3x geometry input (instead of struct)
2012-12-22 22:40 roboos
* [r7258] ft_convert_units.m, ft_headmodel_concentricspheres.m, ft_headmodel_localspheres.m,
ft_headmodel_singlesphere.m: bugfix - the units were not copied out of th einput geometry,
or estimated. This fixes a problem that was not yet fixed in
http://bugzilla.fcdonders.nl/show_bug.cgi?id=1908. Thanks to Vladimir for reproting it.
2012-12-21 11:37 roboos
* [r7248] private/ft_datatype_sens.m: automatically synchronized identical files to revision
7247
2012-12-21 08:42 roboos
* [r7243] private/ft_datatype_sens.m: automatically synchronized identical files to revision
7242
2012-12-19 20:49 roboos
* [r7235] ft_headmodel_concentricspheres.m, ft_headmodel_localspheres.m,
ft_headmodel_singlesphere.m: enhancement - small change that makes the units handling
consistent over the three functions, see also
http://bugzilla.fcdonders.nl/show_bug.cgi?id=1908
2012-12-19 20:35 roboos
* [r7234] ft_headmodel_localspheres.m: bugfix - there was a problem with the input if the
units were not specified by the user, not in the geometry. It broke some test scripts,
these now work again. See http://bugzilla.fcdonders.nl/show_bug.cgi?id=1908
2012-12-18 14:58 johzum
* [r7232] ft_headmodel_localspheres.m: bugfix - gives units to default values for radius,
maxradius and baseline, and uses input units correctly for geometry.
2012-12-18 11:22 johzum
* [r7227] ft_headmodel_bemcp.m: restructuring - checks for number of bnd and assignment of
default conductivity values in more sensible order now.
2012-12-18 11:17 johzum
* [r7226] ft_headmodel_concentricspheres.m: enhancement: now support for one sphere for
default conductivity value.
2012-12-18 11:10 johzum
* [r7225] ft_headmodel_simbio.m: bugfix: incorrectly called shape.tissuelabel{i} now changed
to vol.tissuelabel{i}
2012-12-18 11:09 johzum
* [r7224] ft_headmodel_fns.m: documentation: varargin options now explained.
2012-12-13 16:39 roboos
* [r7185] ft_senstype.m: documentation - chamm change in the formatitng of a comment
2012-12-13 16:34 roboos
* [r7183] private/ft_datatype_sens.m: automatically synchronized identical files to revision
7182
2012-12-13 16:22 roboos
* [r7181] ft_prepare_vol_sens.m: bugfix - when making a selection in chanpos, also update
the chantype, chanunit and chanori if present
2012-12-13 15:44 roboos
* [r7180] private/ft_datatype_sens.m: automatically synchronized identical files to revision
7179
2012-12-13 14:14 roboos
* [r7178] private/channelposition.m, private/ft_datatype_sens.m: automatically synchronized
identical files to revision 7177
2012-12-13 11:50 roboos
* [r7172] private/ft_hastoolbox.m: automatically synchronized identical files to revision
7171
2012-12-12 08:36 roboos
* [r7145] private/ft_datatype_sens.m: automatically synchronized identical files to revision
7144
2012-12-06 21:21 roboos
* [r7123] compat/apply_montage.m, compat/compute_leadfield.m, compat/convert_units.m,
compat/estimate_units.m, compat/inside_vol.m, compat/prepare_vol_sens.m,
compat/senslabel.m, compat/senstype.m, compat/sourcedepth.m, compat/transform_headshape.m,
compat/transform_sens.m, compat/transform_vol.m, compat/voltype.m, ft_apply_montage.m,
ft_average_sens.m, ft_compute_leadfield.m, ft_convert_units.m, ft_estimate_units.m,
ft_fetch_headshape.m, ft_headmodel_asa.m, ft_headmodel_bemcp.m,
ft_headmodel_concentricspheres.m, ft_headmodel_dipoli.m, ft_headmodel_fns.m,
ft_headmodel_halfspace.m, ft_headmodel_infinite.m, ft_headmodel_interpolate.m,
ft_headmodel_localspheres.m, ft_headmodel_openmeeg.m, ft_headmodel_simbio.m,
ft_headmodel_singleshell.m, ft_headmodel_singlesphere.m, ft_headmodel_slab.m,
ft_inside_vol.m, ft_prepare_vol_sens.m, ft_senslabel.m, ft_senstype.m, ft_sourcedepth.m,
ft_transform_headshape.m, ft_transform_sens.m, ft_transform_vol.m, ft_voltype.m,
private/add_mex_source.m, private/ama2vol.m, private/bounding_mesh.m,
private/channelposition.m, private/compile_mex_list.m, private/cornerpoints.m,
private/eeg_halfspace_medium_leadfield.m, private/eeg_halfspace_monopole.m,
private/eeg_infinite_monopole.m, private/eeg_leadfield1.m, private/eeg_leadfield4.m,
private/eeg_leadfield4_prepare.m, private/eeg_leadfieldb.m, private/eeg_slab_monopole.m,
private/elproj.m, private/find_innermost_boundary.m, private/find_outermost_boundary.m,
private/fitsphere.m, private/fixname.m, private/ft_datatype_headmodel.m,
private/ft_datatype_sens.m, private/ft_getopt.m, private/ft_hastoolbox.m,
private/get_dip_halfspace.m, private/getsubfield.m, private/halfspace_medium_leadfield.m,
private/hasyokogawa.m, private/headcoordinates.m, private/inf_medium_leadfield.m,
private/issubfield.m, private/istrue.m, private/keyval.m, private/leadfield_fns.m,
private/leadfield_interpolate.m, private/leadfield_simbio.m, private/leadsphere_all.m,
private/legs.m, private/lmoutr.m, private/loadama.m, private/magnetic_dipole.m,
private/match_str.m, private/meg_forward.m, private/meg_ini.m, private/normals.m,
private/plgndr.m, private/project_elec.m, private/ptriproj.m, private/scalingfactor.m,
private/solid_angle.m, private/surface_nesting.m, private/transfer_elec.m,
private/triangle4pt.m, private/undobalancing.m, private/warning_once.m,
private/warp_apply.m: cleanup - added copyrights and svn id to many files, updated help,
some changes in whitespace, set svn:keywords property. There should not be any functional
change.
2012-12-06 08:04 roboos
* [r7117] ft_apply_montage.m: automatically synchronized identical files to revision 7116
2012-12-05 21:02 roboos
* [r7112] ft_apply_montage.m: restructuring - renamed the input argument from sens to input,
changed the if-elseif-elseif into a switch with explicit handling of input data, also
remove chantype and chanunit for the other inputs
2012-12-05 11:23 lilmag
* [r7094] ft_senstype.m: bugfix: bug1869 sens was not always defined yet when it has been
called which caused error
2012-12-04 13:17 roboos
* [r7078] ft_compute_leadfield.m, ft_headmodel_interpolate.m, ft_prepare_vol_sens.m,
private/leadfield_interpolate.m: enhancement - moved the channel interpolation from
ft_prepare_vol_sens to test_headmodel_interpolate, moved the nifti memmapping from
ft_compute_leadfield to ft_prepare_vol_sens (i.e. both one level up). Updated the test
script. See http://bugzilla.fcdonders.nl/show_bug.cgi?id=1317
2012-11-30 15:47 roboos
* [r7069] ft_apply_montage.m, ft_headmodel_interpolate.m, ft_prepare_vol_sens.m,
private/ft_datatype_headmodel.m, private/leadfield_interpolate.m: enhancement - made a
first working implementation of the leadfield interpolation forward method, see
http://bugzilla.fcdonders.nl/show_bug.cgi?id=1317
2012-11-30 15:44 roboos
* [r7068] private/channelposition.m: automatically synchronized identical files to revision
7067
2012-11-30 15:41 roboos
* [r7065] private/ft_datatype_sens.m: automatically synchronized identical files to revision
7064
2012-11-30 09:38 roboos
* [r7063] private/ft_getopt.mexw64: automatically synchronized identical files to revision
7062
2012-11-29 22:16 roboos
* [r7059] private/ft_getopt.mexa64: automatically synchronized identical files to revision
7058
2012-11-28 16:13 jansch
* [r7044] ft_senstype.m: enhancement - correctly detect bti248grad, addressing bug 1807
2012-11-28 13:54 eelspa
* [r7022] ft_senstype.m: ft_megplanar now updated grad.type, and ft_senstype knows to
respect this type field (bug 1858)
2012-11-27 22:03 roboos
* [r7003] private/scalingfactor.m: automatically synchronized identical files to revision
7002
2012-11-27 15:54 roboos
* [r7000] ft_compute_leadfield.m, ft_headmodel_interpolate.m, ft_prepare_vol_sens.m,
ft_voltype.m, private/leadfield_interpolate.m: enhancement - implemented the skelleton for
leadfield interpolation, see http://bugzilla.fcdonders.nl/show_bug.cgi?id=1317
2012-11-27 08:58 roboos
* [r6994] ft_headmodel_concentricspheres.m: enhancement - restored old default functionality
for conductivity, now specifically for 3 and 4 sphere versions after sorting the spheres,
see http://bugzilla.fcdonders.nl/show_bug.cgi?id=1854
2012-11-19 22:00 roboos
* [r6959] private/ft_getopt.mexw64: automatically synchronized identical files to revision
6958
2012-11-15 14:38 roboos
* [r6940] ft_compute_leadfield.m: enhancement - ensure that simbio is on path inside
ft_compute_leadfield, updated the test_bug1820 script (which now runs through)
2012-11-15 09:45 roboos
* [r6936] ft_compute_leadfield.m: bugfix - the API to leadfield_simbio has changed -> no
sens input any more
2012-11-15 09:32 roboos
* [r6934] private/ft_hastoolbox.m: automatically synchronized identical files to revision
6933
2012-11-15 08:18 roboos
* [r6929] ft_headmodel_simbio.m, private/leadfield_simbio.m: enhancement - updated the
simbio EEG FEM forward calculation according to the suggestions by Johannes, see
http://bugzilla.fcdonders.nl/show_bug.cgi?id=1820
2012-11-15 08:15 roboos
* [r6928] ft_prepare_vol_sens.m: enhancement - added simbio code as suggested by Johannes,
ensure that simbio (and openmeeg) toolboxes are on path, give error for application on meg
data (not yet implemented)
2012-11-12 20:17 roboos
* [r6911] private/channelposition.m, private/undobalancing.m: automatically synchronized
identical files to revision 6910
2012-11-10 07:47 roboos
* [r6905] private/ft_getopt.mexmaci64: automatically synchronized identical files to
revision 6904
2012-11-09 19:21 jansch
* [r6900] private/normals.m: automatically synchronized identical files to revision 6899
2012-11-08 12:10 roevdmei
* [r6893] private/ft_hastoolbox.m: automatically synchronized identical files to revision
6892
2012-11-08 11:28 roevdmei
* [r6891] private/ft_hastoolbox.m: automatically synchronized identical files to revision
6890
2012-11-07 14:15 eelspa
* [r6888] private/warning_once.m: automatically synchronized identical files to revision
6887
2012-11-06 08:43 roboos
* [r6875] private/match_str.m: automatically synchronized identical files to revision 6874
2012-11-04 15:55 roboos
* [r6869] ft_convert_units.m: enhancement - also deal with the grad.tra matrix in case it
expresses channel units as T/m ot T/cm (see bug 963 and bug 953).
2012-11-03 10:16 roboos
* [r6864] ft_headmodel_concentricspheres.m: enhancement - specify defaults for 3-sphere
model (used to be absent)
2012-11-03 10:12 roboos
* [r6862] private/inf_medium_leadfield.m: bugfix - a warning would not always be given at
the appropriate times, no computational functionality was affected
2012-11-02 10:21 roboos
* [r6855] private/ft_datatype_sens.m: automatically synchronized identical files to revision
6854
2012-11-02 10:21 roboos
* [r6854] ft_senstype.m: enhancement - improved automatic detection of MEG system type,
channel type and channel units
2012-11-02 09:47 roboos
* [r6851] ft_senslabel.m, ft_senstype.m: enhancement - improved detection of itab28 system
2012-11-02 09:42 roboos
* [r6850] ft_senstype.m: automatically synchronized identical files to revision 6849
2012-11-02 09:41 roboos
* [r6848] ft_senslabel.m: automatically synchronized identical files to revision 6847
2012-11-02 09:02 roboos
* [r6845] ft_senstype.m: enhancement - added test script for bug 1807 and include bti248grad
in ft_senstype, note that the bug is not yet fixed
2012-10-31 17:04 roboos
* [r6843] private/ft_datatype_sens.m: automatically synchronized identical files to revision
6842
2012-10-30 22:41 roboos
* [r6834] ft_compute_leadfield.m: enhancement - added extra option unit, which can be
arbitrary (default and old behaviour) or si. With si, the input pos+sens+vol are converted
on the fly into meter and the function ensures that the output is T, T/m or V.
2012-10-30 22:38 roboos
* [r6832] ft_convert_units.m: enhancement - inserted an experimental piece of code that
converts the grad.tra matrix in case of planar gradiometers (i.e. neuromag), it is still
disabled
2012-10-30 22:37 roboos
* [r6831] private/ft_datatype_sens.m: automatically synchronized identical files to revision
6830
2012-10-30 21:55 roboos
* [r6828] ft_convert_units.m, private/scalingfactor.m: enhancement - use the common helper
function to determine the scaling factor between geometrical units
2012-10-29 21:01 roboos
* [r6818] ft_voltype.m: bugfix - also detect an infinite volume conductor if it specifies
the geometrical units (for the rest it is empty)
2012-10-29 20:34 roboos
* [r6816] private/ft_datatype_headmodel.m: bugfix - removed the call to ft_voltype, thereby
solving recursion problem. Furthermore, I moved the section to the 2012 piece of the code,
not to the general end of the function.
2012-10-29 20:32 roboos
* [r6814] ft_convert_units.m: enhancement - also support the units of an infinite volume
conductor (with a magnetic dipole for MEG or an electric dipole for EEG), see
http://bugzilla.fcdonders.nl/show_bug.cgi?id=1796#c3
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